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HARP tracking using locally-uniform deformation assumption
© Fahmy et al.; licensee BioMed Central Ltd. 2014
Published: 16 January 2014
Tracking of the myocardium points in tagged MRI images using the Harmonic Phase (HARP) method is widely used to estimate the myocardium regional function. Nevertheless, mistracking might occur in HARP due to errors in selecting the phase extraction filter or due to violation of phase-constancy near the myocardium edges . In this work, we add a constraint that within any small neighborhood the myocardium deformation is uniform which allows using common methods of optical flow tracking such as the Lucas-Kanade algorithm . We show that this assumption significantly improves the reliability of the HARP tracking especially at the borders of the myocardium.
Given two tagged MRI images (with horizontal and vertical tags) acquired at time, t, the phase image is extracted using the HARP method in both images. Let these two HARP images be H1(x,y;t) and H2(x,y;t). Assuming that the myocardium deformation is uniform within a small neighborhood containing N pixels around a given pixel (x,y), a modified version of the LK optical flow tracking is used to track the pixel (x,y) between the two consecutive timeframes. The modification is based on calculating the image temporal and spatial gradients from both the horizontal and vertical HARP images. Numerical phantom of the heart has been used to determine the performance of the proposed method relative to the HARP at different noise levels. The error was recorded based on the ground truth values specified in the simulation. In addition, preliminary results on real datasets from 3 patients have been used to compare the two techniques, where points lying on myocardial contours (endo-, mid-wall, and epi-) have been tracked and the number of (visually) mistracked points was used as an indication of the reliability of the technique.
A modified HARP method for tracking the myocardium in tagged MRI images has been proposed. The method has significantly improved the tracking accuracy at the edges of the myocardium.
This work is fully funded by a grant from the ITAC program, ITIDA agency, Ministry of CIT, Egypt.
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