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Optimization of Improved Motion-sensitized Driven-equilibrium (iMSDE) blood suppression for carotid artery wall imaging
Journal of Cardiovascular Magnetic Resonance volume 16, Article number: 61 (2014)
Improved motion-sensitized driven-equilibrium (iMSDE) preparations have been successfully used in carotid artery wall imaging to achieve blood suppression, but it causes notable signal loss, mostly due to inherent T2 decay, eddy current effects and B1+ inhomogeneity. In this study, we investigate the signal to noise ratio (SNR) and blood suppression performance of iMSDE using composite RF pulses and sinusoidal gradients. Optimized first moment (m1) values for iMSDE prepared T1- and T2- weighted (T1- and T2-w) imaging are presented.
Twelve healthy volunteers and six patients with carotid artery disease underwent iMSDE and double inversion recovery (DIR) prepared T1- and T2-w fast spin echo (FSE) MRI of the carotid arteries. Modified iMSDE module using composite RF pulses and sinusoidal gradients were evaluated with a range of m1. SNR of adjacent muscle, vessel wall and the lumen were reported. The optimized iMSDE module was also tested in a 3D variable flip angle FSE (CUBE) acquisition.
The SNR of muscle was highest using sinusoidal gradients, and the relative improvement over the trapezoidal gradient increased with higher m1 (p<0.001). Optimal SNR was observed using an iMSDE preparation scheme containing two 180° composite pulses and standard 90° and -90° pulses (p=0.151). iMSDE produced better blood suppression relative to DIR preparations even with a small m1 of 487 mT*ms2/m (p<0.001). In T1-w iMSDE, there was a SNR decrease and an increased T2 weighting with increasing m1. In T2-w iMSDE, by matching the effective echo time (TE), the SNR was equivalent when m1 was <= 1518 mT*ms2/m, however, higher m1 values (2278 – 3108 mT*ms2/m) reduced the SNR. In the patient study, iMSDE improved blood suppression but reduced vessel wall CNR efficiency in both T1-w and T2-w imaging. iMSDE also effectively suppressed residual flow artifacts in the CUBE acquisition.
iMSDE preparation achieved better blood suppression than DIR preparation with reduced vessel wall CNR efficiency in T1-w and T2-w images. The optimized m1s are 487 mT*ms2/m for T1-w imaging and 1518 mT*ms2/m for T2-w imaging. Composite 180° refocusing pulses and sinusoidal gradients improve SNR performance. iMSDE further improves the inherent blood suppression of CUBE.
Carotid atheroma is a known risk factor for subsequent stroke . High resolution cardiovascular magnetic resonance (CMR) of the carotid artery allows for the visualisation and quantification of plaque composition and morphology and helps patient risk stratification . Blood suppression is essential for black blood vessel wall imaging, and unsuppressed intra-luminal blood leads to plaque mimicking artifacts . Double inversion-recovery (DIR) methods  have become the de facto standard for blood suppressed vessel wall imaging. However, this method is sensitive to the rate of flow replenishment which leads to plaque-mimicking artefacts in the presence of slow and turbulent flow that often occurs around the carotid bifurcation .
Motion-sensitized driven-equilibrium (MSDE) preparation has been proposed as an alternative blood suppression technique ,. An improved version of MSDE (iMSDE) has also been proposed which demonstrated better SNR performance ,. The blood suppression capability of iMSDE is not limited by the rate of flow replenishment, and it can suppress blood flow in every direction by applying flow sensitizing gradients along each axis. iMSDE has the potential to suppress turbulent and slow blood flow, which requires the prescription of higher m1 values. Furthermore, since iMSDE requires a shorter preparation time relative to DIR preparation, it is more time efficient.
One limitation of iMSDE preparation is that it causes notable signal loss, mostly due to T2 decay during the iMSDE preparation time. It is also sensitive to eddy current effects and B1+ non-uniformity . Signal loss also becomes worse when high m1 values are prescribed .
T1- and T2-weighted (T1- and T2-w) double inversion recovery (DIR) prepared fast spin echo (FSE) sequences have been extensively used for plaque component characterization , however, carotid wall CMR with iMSDE preparation were rarely reported. Wang et al previously reported iMSDE prepared proton-density-weighted (PD-w) with m1 of 945 and 1524 mT*ms2/m . Balu et al previously reported an iMSDE prepared 3D MERGE sequence with an m1 of 1524 mT*ms2/m . However, to date there is a paucity of data comparing DIR and iMSDE to achieve optimal blood suppression and a lack of data on optimised iMSDE preparation timings for T1- and T2-w FSE protocols.
This study measures iMSDE induced signal intensity decay through phantom and volunteer studies. The optimized techniques were then tested on patients. These experiments were conducted across a range of first order moments (m1) used in the literature  and across T2 values known to reflect plaque composition . Composite radiofrequency (RF) pulses are known to potentially reduce the signal loss due to B1+ non-uniformity , and sinusoidal gradients can potentially reduce eddy current effects. In this study, we report optimizations of SNR and blood suppression performance in iMSDE prepared carotid vessel wall CMR using composite RF pulses and sinusoidal gradients. DIR and iMSDE prepared T1 and T2-w protocols are then presented and compared in a group of normal volunteers and patients.
3D black blood variable flip angle FSE sequences are currently topical and have been applied to carotid imaging due to their intrinsic blood suppression ability and high SNR efficiency ,. However, residual artefacts can still appear at the carotid bifurcation, due to slow and complex flow . In this study we briefly evaluate if the optimized iMSDE module can suppress these artefacts.
The experimental observations reported in this study were conducted on uniform test objects, calibrated gel phantoms, normal volunteers and asymptomatic patients. Both the volunteer and patient experiments were conducted following local ethical committee approval, all subjects involved gave informed written consent. The institutional review board of Addenbrooke’s hospital (Cambridge, UK) approved the whole study. The normal volunteers had the following demographics: n = 12, aged 25-50 years, 8 male. The patients had confirmed stenosis >30% and the following demographics: n = 6, mean age 65.7 years [range: 54 to 76 years], male = 3.
The test object experiments examined the image non-uniformity using permutations of standard and composite RF pulses, and compared theoretical and observed SNR change as a function of m1 using both trapezoidal and sinusoidal gradient types. The volunteer experiments measured sternocleidomastoid (SCM) muscle SNR changes using different RF pulse types, and also measured the intra-lumen and SCM muscle SNR change as a function of m1 and motion sensitizing gradient type. Optimizations for effective preparation regimes are reported for T1- and T2-w protocols by comparing conventional DIR preparations with iMSDE preparations with varying m1. The optimized iMSDE protocol was then validated on patients.
Pulse sequence diagrams of the iMSDE preparations used are shown in Figure 1. The specific parameters used to obtain the reported first order moments are listed in Table 1. The imaging experiments were conducted on a 1.5 T MR system (MR450, GE Healthcare, Waukesha, WI).
Composite RF pulses
A uniform cylindrical test object was scanned using a transmit/receive birdcage head coil. A PDw FSE sequence was prescribed with the following parameters: TR/TEeff: 3000 ms/8.8 ms; 16 cm × 16 cm field of view (FOV), 256 × 256 matrix, 5 mm slice thickness; number of excitations (NEX) = 1; echo train length (ETL) = 10. A single slice was prescribed through the middle of the phantom. iMSDE preparations were prescribed using variable RF pulse types including: no composite pulse (NOCP), composite -90° (CP90), composite 180° (CP180) and both composite 180° and -90° (CP180_90). Image non-uniformity was examined and compared between sequences. The use of a transmit/receive birdcage head coil allowed us to compare signal intensity variation as a function of the iMSDE preparation regime without dominant spatial location signal intensity variation as a result of RF reception (B1-) non-uniformity.
Motion sensitizing gradient and first order moment
Two gels with known T2 values of 50 ms and 89 ms respectively (Eurospin Test Object TO5, Diagnostic Sonar Ltd, West Lothian, Scotland, UK) were scanned using the same head coil. The gels were selected to best correspond with the reported T2 values of plaque  and SCM tissue , found in vivo. Since no in vivo T2 measurement of SCM in 1.5 T was available, its T2 value was approximated using values from 0.5 T and 3 T ,.
A PDw FSE sequence was prescribed with the following parameters: TR/TEeff: 3000 ms/8.8 ms; 24 cm × 24 cm FOV, 256 × 256 matrix, 5 mm slice thickness; NEX = 1; ETL = 10. A single slice was prescribed through the middle of the gels. iMSDE preparations were prescribed using trapezoidal and sinusoidal gradients with m1 values ranging from 181 to 3108 mT*ms2/m (defined in Table 1) using a composite 180° pulse. The experiment was then repeated to acquire a conventional PDw image without iMSDE preparation. The SNR of the gels was measured and compared between sequences.
The theoretical model for T2 decay effects during the iMSDE preparation was calculated as where TiMSDE is the time between the 90 and -90 RF pulses in the iMSDE module.
Volunteer and Patient studies
Twelve healthy volunteers underwent DIR and iMSDE prepared, ungated, T1- and T2-w imaging of the carotid arteries using a 4-channel phased-array carotid coil (PACC, Machnet BV, Elde, The Netherlands). Scan parameters for the FSE sequence were: TR/TE (T1-w): 800 ms/10 ms; TR/TEeff (T2-w): 2500 ms/50 ms; 14 cm × 14 cm FOV, 256 × 192 matrix, 3 mm slice thickness, NEX = 2; ETL (T1-w) = 10; ETL (T2-w) = 12, acquiring 4 slices to cover the bifurcation. A single and multi-slice DIR sequence was prescribed as defined previously . Both iMSDE and DIR sequences acquired 1 slice per TR in the T1-w protocol and 4 slices per TR for the T2-w protocol. To offset the inherent T2 decay during the iMSDE preparation, the preparation time was included in the calculation of the effective TE, i.e. prescribed TE = TEeff − TiMSDE. For example, in T2-w iMSDE acquisition with an m1 of 921 mT*ms2/m and a preparation time 17.2 ms, the prescribed TE was calculated as: 50 ms − 17.2 ms = 32.8 ms.
Six volunteers underwent iMSDE prepared T1-w FSE sequences using composite RF pulses and sinusoidal/trapezoidal gradients. Six separate volunteers also underwent combinations of DIR and iMSDE prepared T1- and T2- w imaging using sinusoidal gradients to determine optimal m1.
For validation purposes six patients were scanned with optimized settings for T1 and T2-w protocols.
To evaluate the iMSDE module within the 3D variable flip angle FSE sequence (CUBE, GE Healthcare, Waukesha, WI), a volunteer was scanned with and without iMSDE preparation with the following scan parameters: TR/TE: 440 ms/10 ms; 14 cm × 14 cm FOV; 224 × 224 matrix; 40 coronal slices; 1.2 mm slice thickness (interpolated to 0.6 mm); ETL 24. A 487 mT*ms2/m m1 and sinusoidal gradients were used for the iMSDE preparation.
For each carotid artery, 4 slices were selected for analysis. Measurements of SNR in the adjacent SCM muscle and within the lumen were performed using CMR tools (Cardiovascular Imaging Solutions, London, UK). In the six patients, the vessel wall SNR was also measured. Noise was determined as the standard deviation of the signal in an artefact free background region. SNR was calculated as:
Where S is the signal intensity, σ ⋅ is the standard deviation of the noise, and the multiplier 0.695 corresponds to a four-channel coil correction 
Contrast to noise ratio (CNR) of muscle and wall was defined as:
Where Tsl ⋅ is the scan time (in minutes) per slice, and SLth ⋅ is the slice thickness (in mm).
Normality assumptions were formally assessed using a Shapiro-Wilk’s test. Distributions were summarised using the median [inter-quartile range]. An ANOVA was performed to test group differences between muscle and luminal SNR and CNR using the different composite RF preparations and also to test differences between sinusoidal and trapezoidal gradients. A Bonferroni correction was applied to account for the multiple comparison problem. Therefore, to account for the fact that 16 formal hypotheses have been investigated statistical significance was defined as p < 0.003125 i.e. 0.05/16. SNR and CNR comparison between groups was performed using non-parametric Wilcoxon signed-rank test. All the statistical analyses were performed using the statistical programming language R version 2.7.0 (The R Foundation of Statistical Computing, Vienna, Austria).
The test object study demonstrated that a composite 180° pulse improved the image uniformity, whereas the addition of a composite -90° pulse decreased the uniformity (Figure 2). We also observed that signal intensity decreased as a function of increasing first order moment m1 (Figure 3). T2 decay during TiMSDE was responsible for the majority of the signal decrease. iMSDE using sinusoidal gradients demonstrated a better SNR performance compared to iMSDE using trapezoidal gradients with equivalent m1s, with this trend becoming more significant with increasing m1. This reduction was therefore attributed to eddy current effects. In addition, the signal drop was more significant in the gel with the shorter T2.
In the volunteer study we observed that the composite 180° (CP180) yielded the best SNR performance (Figure 4 and Table 2). We noted that adding a composite -90° pulse reduced the SNR. Although the CP180 method appeared to provide the highest muscle SNR, we found no statistically significant SNR (p = 0.151) or blood suppression (p = 0.387) differences between RF preparations in vivo.
T1-w iMSDE preparation using sinusoidal gradients showed better muscle SNR compared with trapezoidal gradients (Figure 5 and Table 3). This improvement was more significant with increasing m1 (6.5% higher SNR for 487 m1, 10.8% higher SNR for 1518 m1, 16.4% higher SNR for 3108 m1, p < 0.001) (Table 3). There was no significant difference in blood suppression as a function of gradient type (p = 0.338).
T1-w or T2-w iMSDE demonstrated better blood suppression compared with DIR (Figures 6 and 7) even with a small m1 value of 487 mT*ms2/m (p < 0.001). In T1-w iMSDE, the muscle SNR decreased with increasing m1. The lumen SNR decreased with the increased m1, but when the m1 was greater than 925 mT*ms2/m, no further improvement was observed. In T2-w iMSDE, by keeping the effective TE equivalent, no measurable SNR loss was found when m1 less than or equal to 1518 mT*ms2/m. Lumen SNR decreased with increased m1, but the improvement was negligible when m1 was greater than or equal to 1518 mT*ms2/m.
The optimized iMSDE prepared T1w and T2w protocols were applied in six patients. Good image quality was noted with better blood suppression (p < 0.001) with respect to the DIR method (Figure 8 and Table 4). In iMSDE T1w imaging, the SNR loss in muscle was 40.3%, whilst the SNR loss in the wall was 34.6%. In iMSDE T2w imaging, the SNR of muscle increased by 5.8% (due to the shorter effective TE) whilst the wall SNR decreased by 22.2%.
The optimized iMSDE module also removed flow artefacts in a T1w CUBE sequence but a reduction in image SNR was noted (Figure 9).
DIR prepared FSE sequences have been extensively used for carotid plaque imaging . Wang et al previously reported that MSDE preparation achieved better blood suppression and higher muscle to lumen CNR efficiency than multi-slice DIR when using a T2-w FSE sequence . Recently, Obara et al found 3D iMSDE prepared turbo field echo sequences had a higher muscle to lumen CNR efficiency than DIR prepared 2D FSE sequences for both T1-w and T2-w imaging in a group of five volunteers . However, to date there have been no studies comparing the relative blood suppression and vessel wall CNR performance of iMSDE and DIR prepared FSE in generating the most clinically relevant T1- and T2- contrast weightings used for plaque imaging. Furthermore, the choice of an optimal first order moment (m1) within the iMSDE module is important, since m1 directly determines the blood suppression performance, and alters the image contrast and SNR.
In this study we demonstrated that a small m1 (487 mT*ms2/m) can achieve better blood suppression, albeit with reduced SNR in T1-w and T2-w FSE compared with conventional DIR preparation. We reported optimized m1 values to achieve blood suppression and SNR performance in both T1- and T2-w FSE sequences. In theory, blood suppression of iMSDE improves with increasing m1. However, a large m1 requires a longer preparation time that results in increased T2 decay and further signal loss due to the greater eddy current effects, hence causes an overall decrease in SNR. Therefore, for T1w contrast, m1 needs to be minimized in order to reduce T2 weighting and SNR loss. We found a small m1 (487 mT*ms2/m) can achieve satisfactory blood suppression, and at the same time minimize the SNR loss and T2 weighting (increasing the effective echo time by 13.6 ms) (Figures 6 and 7). Nonetheless, the considerable SNR loss (~40%) in T1w imaging can possibly limit its application in high-resolution imaging when SNR is low. When SNR is adequate, iMSDE can be used in T1w imaging to reduce plaque mimicking flow artefacts. Other novel blood suppression techniques, such as Delayed Alternating with Nutation for Tailored Excitation (DANTE), which induces smaller T2/T1 contrast changes with less SNR loss, may be optimal for T1w imaging . Recently, Li et al. found DANTE has a higher vessel wall CNR efficiency than iMSDE and DIR methods in multi-contrast FSE imaging .
We found iMSDE preparation can achieve better blood suppression and better/comparable muscle SNR than DIR in T2-w imaging without affecting image contrast by matching the effective echo times with m1 < =1518 mT*ms2/m (Figures 6 and 7). Higher m1 values are not recommended as they lead to significant SNR loss without further improving the blood suppression.
As shown in the phantom study (Figure 3), plaque components with shorter T2 values than muscle would be expected to have even greater SNR loss due to the iMSDE preparation time. This hypothesis was evaluated in the patient sub-study.
In the volunteer study we found that the iMSDE preparation using a composite 180° RF pulse reduced the signal loss due to B1+ non-uniformity (Figure 4), which agreed with the test object results (Figure 2), but no significant differences were found (Table 2). Composite -90° did not appear to improve the image uniformity (Figure 2) and also resulted in a slight SNR decrease (Figure 4). This was due to the composite -90° slightly increasing the iMSDE preparation time by 2.4 ms (the composite -90° pulse comprises a -360° pulse and a 270° pulse with a total duration of 2.8 ms, while a simple -90° pulse has a duration of 0.4 ms).
The use of sinusoidal flow dephasing gradients reduced the signal loss presumed to be caused by eddy current effects in both the phantom and volunteer data. This trend became more obvious at higher m1 (Figure 5 and Table 2), possibly due to the increased eddy currents when larger flow-sensitizing gradients were applied. An intuitive advantage of applying sinusoidal gradients is that the dB/dt is relatively low which we would expect to lead to a reduction in eddy current induced artifacts .
Optimisation of arterial wall imaging using iMSDE blood suppression has potential clinical value, particularly for assessment of atheromatous plaques in the carotid artery. The carotid bifurcation is the most common anatomical site of atheroma formation. Due to irregular geometry and complex flow patterns particularly at higher grades of luminal stenosis, blood suppression can prove particularly challenging leading to plaque mimicking artefacts . This may result in inaccurate measurements of plaque burden and luminal stenosis, both of which are clinically important criteria for refined severity assessment of carotid artery disease -.
Plaque mimicking artefacts were frequently observed in our normal volunteer cohort (Figure 7). This may have been due to stagnant blood, which is common in subjects without luminal stenosis. This finding is also common in patients where medications such as ß-blockers may result in significant bradycardia. In our patient scans, blood flow artefacts were evident on both the T1w and T2w imaging, and the optimized iMSDE module successfully suppressed the flow artefacts without degrading the image quality (Figure 8).
Compared to DIR, iMSDE was found to provide a substantial improvement in blood suppression, thereby distinguishing the arterial lumen from the inner wall boundary and minimizing the likelihood of mistaking flow artefacts for wall thickening (Figures 7 and 8). Moreover, compared to trapezoidal flow dephasing gradients, the use of sinusoidal gradients resulted in an increase in muscle SNR (Figure 4) without compromising blood suppression. Also noteworthy is the fact that compared to DIR, iMSDE has a shorter preparation time (~20 ms) compared with DIR (>200 ms) . The time efficiency of iMSDE preparation makes this technique more useful for vessel wall imaging than DIR preparation in multi-slice imaging.
Motion sensitivity of iMSDE may cause carotid wall signal loss due to pulsatility. However, the pulsatile motion of the carotid vessel wall during the cardiac cycle (around 1 s) is of the order of 0.4 mm , while the majority of the intra-luminal blood flow velocity is ~10 cm/s . In the patient scan, we observed that in T1w imaging (using a small m1 of 487 mT*ms2/m), the percentage wall SNR decrease was less than the muscle SNR reduction (Table 4); whilst in T2w imaging (using a larger m1 of 1518 mT*ms2/m), the percentage wall SNR reduction was greater than the muscle SNR decrease. This is possibly due to the high m1 inducing signal loss in the wall due to pulsatile motion. However, even with a high m1, the signal loss in the vessel wall was still considered acceptable (~20%) and no obvious image quality degradation was observed.
In this study iMSDE was compared relative to the ungated multi-slice DIR preparation as proposed by Yarnykh and Yuan as the de facto standard . Subsequent work has demonstrated that the ungated approach produces comparable SNR and plaque measurements whilst reducing scan time . It is also important to consider that gated sequences will often produce variable image contrast as a result of variability in triggering.
3D variable flip angle FSE imaging of carotid plaque is gaining popularity for its intrinsic black blood effect, high isotropic resolution, large coverage and high SNR efficiency -. However in some situations of complex flow, it can still exhibit residual flow artefacts .
Previously MSDE has been used with a T2w SPACE (Siemens Healthcare, equivalent to CUBE) acquisition to improve the blood suppression . Similarly, we have shown that our optimized iMSDE module can also improve the blood suppression in T1w CUBE. However, we did note a reduction in SNR. This was possibly a result of the shorter TR (440 ms) used in our T1w CUBE implementation. Since 3D FSE acquisitions such as CUBE and SPACE have an intrinsic black blood effect, a smaller m1 maybe sufficient for additional blood suppression if necessary. Future work will systematically investigate optimal blood suppression regimes appropriate for 3D CUBE.
iMSDE with small m1 (487 mT*ms2/m) achieves better blood suppression but reduced vessel wall CNR efficiency in T1- and T2-w images relative to conventional DIR preparations. iMSDE is promising for T2-w imaging, however, we noted that it significantly reduced SNR and induced extra T2 weightings when applied in T1-w imaging. Optimized m1 for T1-w (487 mT*ms2/m) and T2-w (1518 mT*ms2/m) FSE are determined. The use of composite 180° refocusing pulses and sinusoidal gradients improves the SNR performance without compromising blood suppression efficiency. iMSDE is also suitable for 3D CUBE acquisitions and can further improve its inherent blood suppression.
Improved motion-sensitized driven-equilibrium
Signal to noise ratio
Double inversion recovery
Fast spin echo
Number of excitations
Echo train length
Field of view
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The project was supported by the Addenbrooke’s Charitable Trust and the NIHR comprehensive Biomedical Research Centre award to Cambridge University Hospitals NHS Foundation Trust in partnership with the University of Cambridge, and partly supported by ARTreat European Union Frame Project 7.
The authors declare that they have no competing interests.
CZ designed the study, developed the MR sequences, processed the data and wrote the manuscript; MJG developed the MR sequences and revised the manuscript; JY undertook image analysis tasks and revised the manuscript; US recruited the volunteers and patients and revised the manuscript; JHG processed the data and revised the manuscript; AJP designed the study, processed the data and revised the manuscript. All authors read and approved the manuscript.
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Zhu, C., Graves, M.J., Yuan, J. et al. Optimization of Improved Motion-sensitized Driven-equilibrium (iMSDE) blood suppression for carotid artery wall imaging. J Cardiovasc Magn Reson 16, 61 (2014). https://doi.org/10.1186/s12968-014-0061-5
- Carotid atheroma
- Blood suppression optimization
- Fast spin echo
- Motion-sensitized driven-equilibrium